Biology resolution workflow

Therapeutics Biology Resolution

Resolve how a therapeutic acts through its target on a disease network - the mechanisms driving the response, the on- and off-pathway consequences of target engagement, how resistance emerges across time, and assessing the therapeutics cellular safety across stress- and cytotox-related pathways, in different tissue-derived cells.

Compounds
Antibodies
RNA
Medicines
Gene
Therapies
What it means

A Therapeutics Biology Resolution Workflow establishes how a therapeutic reshapes biology through its target within the disease network.

It reveals the mechanisms underlying response, downstream network effects, and the cell-state context in which efficacy or stress appears.

  • What mechanisms drive the therapeutic response?
  • What on- and off- pathways are activated?
  • How does resistance emerge across dose and time?
  • Do efficacy and stress signatures appear in the same cells or in different cells from other tissues?
Input

A therapeutic, its targets, and the relevant biological context.

  • Therapeutic candidate/modality
  • Known or intended target(s)
  • Disease context and cellular system
  • Dose range and time points
  • Controls, comparators, and optional combination modalities
  • Optional: safety-relevant or tissue-derived cells
Output

A Biology Resolution Data Package containing thousands of Visual Biology Tokens that deliver mechanistic therapeutic insight.

  • Cell images of DNA, RNA and protein modifications, amount and localization and of biological activities
  • Mechanisms of action across a disease network
  • On-target and off-target pathway activation
  • Resistance compensation and adaptive responses across dose and time
  • Evidence to support prioritization, optimization, or de-prioritization
What it resolves
Understand the mechanism
Reveal how a therapeutic acts through its target on the disease network.
Profile efficacy
See whether the intended biological response is achieved.
Assess selectivity
Differentiate on-target biology from broader pathway disruption.
Detect compensation
Identify resistance responses emerging.
De-risk safety
Spot stress and off-target signatures in disease and safety-relevant cells.
Inform strategy
Support prioritization, optimization, combinations, and go/no-go decisions.
How it works
1. Define
Define the aim
Frame the therapeutic question within a disease network and biological context.
2. Design
Design visual biology experiments
Design massive parallel Visual Biology experiments across time points, perturbations and comparators.
3. Execute
Run on the BioGPU Runtime
High-throughput automated execution of Visual Biology experiments at scale.
4. Generate Tokens
Generate Visual Biology Tokens
Every observed cellular activity event is converted into Visual Biology Tokens.
5. Resolve
Deliver the insight
The Agent analyzes the token package to resolve mechanisms, network consequences, efficacy, selectivity, stress biology, and compensation.